人物經(jīng)歷
2002年中國科學(xué)技術(shù)大學(xué)計(jì)算機(jī)系博士畢業(yè)，獲計(jì)算機(jī)軟件與理論專業(yè)博士學(xué)位。
2002年起在國家高性能計(jì)算中心（合肥）從事并行計(jì)算與應(yīng)用相關(guān)的研究工作。
2011年受邀參與《算法導(dǎo)論》第三版的主要翻譯工作。
科研項(xiàng)目
已主持國家重點(diǎn)自然科學(xué)基金子課題及面上課題、973子課題、863子課題1項(xiàng)各1項(xiàng)，作為骨干參加了863、973、發(fā)改委和工信部等課題十余項(xiàng)。
主講課程
并行計(jì)算（計(jì)算機(jī)學(xué)院本科）；并行算法（計(jì)算機(jī)學(xué)院研究生）；算法設(shè)計(jì)與分析（軟件學(xué)院研究生）；多核并行計(jì)算（軟件學(xué)院研究生）。研究方向
1、大數(shù)據(jù)挖掘及生物信息學(xué)算法2、并行分布式系統(tǒng)及性能優(yōu)化科研成果
受邀參與《算法導(dǎo)論》第三版翻譯工作 2011.1 - 2011.11并行計(jì)算模型和性能優(yōu)化，國家863重大項(xiàng)目子課題，2010.1-2010.12單體型問題及其算法研究，國家自然基金面上項(xiàng)目，2010-2012基于龍芯3號(hào)的通信與數(shù)學(xué)庫的研制，“核心電子器件、高端通用芯片及基礎(chǔ)軟件產(chǎn)品”科技重大專項(xiàng)，2009-2012多核并行編程模型，華為基金項(xiàng)目，2011.1-2011.12BWDSP100 C編譯器實(shí)現(xiàn)，核心電子器件、高端通用芯片及基礎(chǔ)軟件產(chǎn)品”科技重大專項(xiàng)，2009-2010多核龍芯處理器系統(tǒng)軟件移植與開發(fā)，國家863重點(diǎn)項(xiàng)目子課題，2008-201論文專著
在Bioinformatics、PLoS ONE、BMC Bioinformatics、計(jì)算機(jī)學(xué)報(bào)和軟件學(xué)報(bào)等刊物和國際學(xué)術(shù)會(huì)議上發(fā)表學(xué)術(shù)論文50余篇。
- Jiaoyun Yang, Yun Xu, Yi Shang. "A new progressive algorithm for multiple longest common subsequences problem and its efficient parallelization".IEEE Trans. on Parallel and Distributed Systems, 2012. DOI: 10.1109/TPDS.2012.202. PreprintYun Xu, Da Teng, Yiming Lei. "MinePhos: a literature mining system for protein phoshphorylation information extraction".IEEE Trans. on Comput. Biology & Bioinformatics, 2012, 9(1): 311-315Yan Li, Jianping Wang, Chunming Qiao, Ashwin Gumaste, Yun Xu, Yinlong Xu. "Integrated Fiber-Wireless (FiWi) Access Networks Supporting Inter-ONU Communications".IEEE/OSA Journal of Lightwave Technology, 2010, 28(5): 714-724Yun Xu, ZhiHao Wang, YiMing Lei, YuZhong Zhao and Yu Xue. "MBA: A Literature Mining System for Extracting Biomedical Abbreviations".BMC Bioinformatics, 2009, 10:14Zhi-Hui Hu, Yun Xu, Liu-Sheng Huang and Howard Leung. "A Chinese Handwriting Education System with Automatic Error Detection".The Journal of Software (JSW), 2009, 4(2): 101-106Guoliang Chen, Guangzhong Sun, Yun Xu and Bai Long. "Integrated research of parallel computing: Status and Future",Chinese Sci Bull, 2009, 54: 1845-1853Yuzhong Zhao, Yun Xu, Zhihao Wang, Hong Zhang and Guoliang Chen. "A Better Block Partition and Ligation Strategy for Individual Haplotyping".Bioinformatics, 2008, 24(23): 2720-2725Yun Xu, Bingfeng Yan, Guoliang Chen. "Core Management and Algorithms in all-to-all Multicast".Chinese Journal of Computer Research and Development, 2008, 45(6): 923-929 (In Chinese)Kunpeng Zhang, Yun Xu, Guoliang Chen. "PECB: Prediction of Enzyme Catalytic Residues Based on Na?ve Bayes Classification".Int. J. of Bioinformatics Research and Application, 2008, 4(3):295-305Yuzhong Zhao, Yun Xu, Qiangfeng Zhang, Guoliang Chen. "An Overview of the Haplotype Problems and Algorithms".Frontiers of Computer Science in China, 2007, Vol.1, No3 : 272-282Zhang, Qiangfeng, Xu, Yun, Chen, Guoliang, Che, Haoyang. "Haplotyping and Haplotype Frequency Estimates on Trio Genotype Data".Chinese Journal of Software, 2007, Vol.18, No.9:2090-2099Qiangfeng Zhang, Yuzhong Zhao, Guoliang Chen, Yun Xu. "Estimate haplotype frequencies in pedigrees".BMC Bioinformatics, 2006, 7 (S4):S5Yun Xu, Guoliang Chen, Qiangfeng Zhang, Jun Gu. "Efficiency Analysis of Asynchronic Parallelization of Randomized Algorithms".Chinese Journal of Software, 2003, Vol.14, No.5:871-876. (In Chinese)Yun Xu, Guoliang Chen, Guoyi Zhang. "A Modified DP Algorithm for Solving Hard SAT Problems".Journal of University of Science and Technology of China, 2002, Vol.32, No.3:358-362. (In Chinese)Yun Xu, Guoliang Chen, Yinlong Xu, Jun Gu. "O(m^2) Time Randomized Algorithms for SAT Problem".Chinese Journal of Computers, 2001, Vol.24, No.11:1136-1141. (In Chinese)Haitao Jiang, Yun Xu, Yin Liao, Guojie Jin, Guoliang Chen. UKCF A New Graphics Driver Cross-platform Translation Framework for Virtual Machines.NPC2012,Accepted.Yun Xu, Yan Li. “ONU Patching for Efficient VoD Service over Integrated Fiber-Wireless (FiWi) Access Networks”.The 6th International ICST Conference on Communications and Networking in China (CHINACOM 2011), August 17-19, 2011, Harbin, China. (Invited Paper)Bo Chen, Yun Xu, Jiaoyun Yang, Haitao Jiang. "A New Parallel Method of Smith-Waterman Algorithm on a Heterogeneous Platform".The 10th International Conference on Algorithms and Architectures for Parallel Processing (ICA3PP2010), Busan, Korea on May 21 ~ 23, 2010, Page(s): 79-90Jiaoyun Yang, Yun Xu, Yi Shang. "An Efficient Parallel Algorithm for Longest Common Subsequence Problem on GPUs". Proceedings of the World Congress on Engineering (WCE 2010),2010, June 30 - July 2, 2010, London, U.K., Page(s): 499-504Yun Xu, Mingzhi Shao, Da Teng. "Optimization of Triangular Matrix Functions in BLAS Library on Looson2F".IFIP International Conference on Network and Parallel Computing (NPC 2010), Zhengzhou, China, 13-15, Sept. 2010. Page(s): 35-45Yu, Linbin, Xu, Yun. "A parallel gibbs sampling algorithm for motif finding on GPU".IEEE International Symposium on Parallel and Distributed Processing with Applications(ISPA 2009), Chengdu, Sichuan, China, 2009, pp555-558Zhang, Hong; Xu, Yun; Zhao, Yuzhong. "Discovery of motif pairs from protein-protein interaction networks".Proceedings. International Joint Conference on Bioinformatics, Systems Biology and Intelligent Computing(IJCBS 2009), Shanghai, China, August, 2009, pp293-296Z. H. Hu, H. Leung and Yun Xu. Stroke Correspondence Based on Graph Matching for Detecting Stroke Production Errors in Chinese Character Handwriting. 8th Pacific-Rim Conference on Multimedia (PCM), 2007, p734-743
獲得榮譽(yù)
1.“并行計(jì)算”課程的創(chuàng)建及其輻射與示范作用，2009，國家教學(xué)成果二等獎(jiǎng)，排名第2；
2.“并行計(jì)算”相關(guān)課程教學(xué)團(tuán)隊(duì)，2009，國家級(jí)教學(xué)團(tuán)隊(duì)，排名第3；
3.“并行計(jì)算”課程的創(chuàng)建及其輻射與示范作用，2008，安徽省教學(xué)成果特等獎(jiǎng)，排名第2；
4. 中國科大王寬誠育才一等獎(jiǎng)，2008。
